Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | AFIC_001727 | O52248 | Positive | 1761447 - 1764608 | 112506.0 |
| extracellular solute-binding protein | AFIC_001728 | P0A234 | Positive | 1764779 - 1766116 | 48254.3 |
| iron abc transporter permease | AFIC_001729 | Q44123 | Positive | 1766172 - 1767872 | 61072.9 |
| abc transporter atp-binding protein | AFIC_001730 | Q7VNG4 | Positive | 1767882 - 1768976 | 39728.9 |
| cpbp family intramembrane metalloprotease | AFIC_001731 | Not Available | Negative | 1769013 - 1769684 | 23635.1 |
| Trna-ser | Not Available | Not Available | Positive | 1769838 - 1769927 | Not Available |
| duf2478 domain-containing protein | AFIC_001733 | Q89EW7 | Negative | 1769993 - 1770523 | 18420.0 |
| septal ring lytic transglycosylase rlpa family protein | AFIC_001734 | Q4ULW1 | Positive | 1770747 - 1771565 | 29076.4 |
| d-alanyl-d-alanine carboxypeptidase | AFIC_001735 | P08506 | Positive | 1771685 - 1772911 | 43755.5 |
| dtmp kinase | AFIC_001736 | B6JEC6 | Positive | 1772939 - 1773613 | 23901.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
