Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter permease | AFIC_001707 | P73451 | Positive | 1740734 - 1741558 | 30032.4 |
| abc transporter atp-binding protein | AFIC_001708 | P39459 | Positive | 1741596 - 1742363 | 28263.6 |
| fad-dependent oxidoreductase | AFIC_001709 | P42435 | Positive | 1742377 - 1743591 | 42581.4 |
| nira family protein | AFIC_001710 | P39661 | Positive | 1743595 - 1745349 | 63532.7 |
| sulfite reductase subunit alpha | AFIC_001711 | Q7N8L6 | Positive | 1745349 - 1746962 | 58846.8 |
| molybdopterin-dependent oxidoreductase | AFIC_001712 | Q06457 | Positive | 1746976 - 1749693 | 98302.6 |
| lamb/ycsf family protein | AFIC_001713 | Q2IW74 | Negative | 1749677 - 1750435 | 26326.5 |
| biotin-dependent carboxyltransferase family protein | AFIC_001714 | P75745 | Negative | 1750432 - 1751367 | 33059.5 |
| 5-oxoprolinase subunit pxpb | AFIC_001715 | P60495 | Negative | 1751364 - 1752101 | 26385.4 |
| ribonuclease activity regulator rraa | AFIC_001716 | Q46DA4 | Positive | 1752233 - 1752940 | 25200.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
