Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| invasion associated locus b family protein | AFIC_001697 | Not Available | Positive | 1729618 - 1730376 | 27032.5 |
| heat shock protein hspq | AFIC_001698 | C6DKX0 | Negative | 1730455 - 1730784 | 12815.0 |
| ubih/ubif family hydroxylase | AFIC_001699 | Q2RMZ4 | Negative | 1730858 - 1732051 | 42701.9 |
| phosphatidylcholine/phosphatidylserine synthase | AFIC_001700 | Q89LF9 | Positive | 1732232 - 1732891 | 23898.9 |
| terc family protein | AFIC_001701 | P43932 | Positive | 1732888 - 1733643 | 27149.1 |
| quinone oxidoreductase | AFIC_001702 | P40783 | Positive | 1733696 - 1734670 | 34847.1 |
| 30s ribosomal protein s12 methylthiotransferase rimo | AFIC_001703 | B6JF93 | Negative | 1734759 - 1736081 | 48952.9 |
| formate/nitrite transporter family protein | AFIC_001704 | Q50568 | Positive | 1736442 - 1737263 | 29368.8 |
| bifunctional protein-serine/threonine kinase/phosphatase | AFIC_001705 | O34507 | Positive | 1737325 - 1739052 | 63686.5 |
| abc transporter substrate-binding protein | AFIC_001706 | P73452 | Positive | 1739284 - 1740600 | 47676.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
