Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--fructose-6-phosphate transaminase (isomerizing) | AFIC_001687 | P59362 | Positive | 1714931 - 1716757 | 65934.3 |
| duf502 domain-containing protein | AFIC_001688 | Q9C8C1 | Positive | 1716867 - 1717637 | 27437.5 |
| hypothetical protein | AFIC_001689 | Not Available | Positive | 1717638 - 1717982 | 12394.2 |
| atp-dependent dna helicase recg | AFIC_001690 | Q9CMB4 | Negative | 1717979 - 1720087 | 77007.4 |
| succinate dehydrogenase assembly factor 2 | AFIC_001691 | C7JGP5 | Positive | 1720300 - 1720587 | 10876.6 |
| transcription-repair coupling factor | AFIC_001692 | Q1RI82 | Positive | 1720584 - 1724102 | 129902.0 |
| prc-barrel domain-containing protein | AFIC_001693 | Not Available | Negative | 1724192 - 1724626 | 15043.9 |
| ggdef domain-containing protein | AFIC_001694 | Not Available | Negative | 1724691 - 1725932 | 43433.5 |
| acyl--coa ligase | AFIC_001695 | P38135 | Negative | 1726032 - 1727543 | 53881.5 |
| extracellular solute-binding protein | AFIC_001696 | Q8FW84 | Negative | 1727540 - 1729360 | 68423.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
