Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2189 domain-containing protein | AFIC_001657 | Not Available | Negative | 1680368 - 1681270 | 32123.2 |
| duf3597 domain-containing protein | AFIC_001658 | Not Available | Positive | 1681579 - 1681944 | 12506.1 |
| fumarylacetoacetate hydrolase family protein | AFIC_001659 | O86042 | Positive | 1682180 - 1682968 | 28071.8 |
| n-acetyltransferase | AFIC_001660 | P39274 | Negative | 1683019 - 1683249 | 8323.92 |
| n-acetyltransferase | AFIC_001661 | P39274 | Negative | 1683320 - 1683592 | 9812.75 |
| spw repeat protein | AFIC_001662 | Not Available | Positive | 1683834 - 1684241 | 15132.6 |
| excinuclease abc subunit uvra | AFIC_001663 | Q89L46 | Negative | 1684317 - 1687298 | 109603.0 |
| porin family protein | AFIC_001664 | P0A3U4 | Negative | 1687584 - 1688285 | 24868.0 |
| single-stranded dna-binding protein | AFIC_001665 | Q89L50 | Positive | 1688727 - 1689242 | 18389.5 |
| dna gyrase subunit a | AFIC_001666 | Q0BST5 | Positive | 1689507 - 1692230 | 100447.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
