Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smc-scp complex subunit scpb | AFIC_001637 | Q83CP9 | Positive | 1662070 - 1662825 | 27462.3 |
| cytochrome c biogenesis protein dipz | AFIC_001638 | P59960 | Positive | 1662897 - 1664669 | 62741.9 |
| twin-arginine translocase tata/tate family subunit | AFIC_001639 | Q6N5X1 | Positive | 1664850 - 1665080 | 8191.89 |
| sec-independent protein translocase protein tatb | AFIC_001640 | Q214X1 | Positive | 1665139 - 1665594 | 16203.1 |
| twin-arginine translocase subunit tatc | AFIC_001641 | A0L833 | Positive | 1665591 - 1666418 | 30183.1 |
| serine--trna ligase | AFIC_001642 | B6JFP3 | Positive | 1666550 - 1668010 | 54295.9 |
| 5'/3'-nucleotidase sure | AFIC_001643 | B6JFP2 | Positive | 1668015 - 1668779 | 28098.5 |
| response regulator | AFIC_001644 | P9WGM2 | Negative | 1668782 - 1669159 | 13976.0 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | AFIC_001645 | B6JFP0 | Positive | 1669317 - 1669973 | 24239.2 |
| lysm peptidoglycan-binding domain-containing m23 family metallopeptidase | AFIC_001646 | A0A0H3C9Q9 | Positive | 1670118 - 1671422 | 45355.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
