Pseudomonas carboxydohydrogena Z-1062

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Pseudomonas carboxydohydrogena Z-1062 is a Gram-negative bacterium characterized by its rod-like shape and the presence of flagella, which facilitate motility. This organism is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic sequence of this strain is available under the accession number CP113162.1, providing a resource for further research into its genetic and metabolic capabilities. As a member of the Pseudomonas genus, Pseudomonas carboxydohydrogena Z-1062 likely plays a role in carbon cycling, given its name, which suggests an association with carbon monoxide metabolism. This trait is significant in ecological contexts where carbon monoxide is produced, such as in the microbial degradation of organic matter or in certain industrial processes. The ability of this bacterium to utilize carbon monoxide may position it as a potential agent for bioremediation, particularly in environments contaminated with carbon-based pollutants. Overall, the characteristics of Pseudomonas carboxydohydrogena Z-1062 underscore its potential ecological contributions, particularly in carbon cycling and environmental cleanup. Further studies focusing on its metabolic pathways and ecological interactions could elucidate its role in microbial communities and environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia carboxydohydrogena
StrainZ-1062

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas carboxydohydrogena Z-1062
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas carboxydohydrogena Z-1062, Complete Genome

Gene Summary

Adenine Count

614120 bp

Thymine Count

614391 bp

Guanine Count

1021703 bp

Cytosine Count

1021226 bp

Genome Length

3271440 bp

Protein-coding Genes

3090 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
smc-scp complex subunit scpbAFIC_001637Q83CP9Positive1662070 - 166282527462.3
cytochrome c biogenesis protein dipzAFIC_001638P59960Positive1662897 - 166466962741.9
twin-arginine translocase tata/tate family subunitAFIC_001639Q6N5X1Positive1664850 - 16650808191.89
sec-independent protein translocase protein tatbAFIC_001640Q214X1Positive1665139 - 166559416203.1
twin-arginine translocase subunit tatcAFIC_001641A0L833Positive1665591 - 166641830183.1
serine--trna ligaseAFIC_001642B6JFP3Positive1666550 - 166801054295.9
5'/3'-nucleotidase sureAFIC_001643B6JFP2Positive1668015 - 166877928098.5
response regulatorAFIC_001644P9WGM2Negative1668782 - 166915913976.0
protein-l-isoaspartate(d-aspartate) o-methyltransferaseAFIC_001645B6JFP0Positive1669317 - 166997324239.2
lysm peptidoglycan-binding domain-containing m23 family metallopeptidaseAFIC_001646A0A0H3C9Q9Positive1670118 - 167142245355.8

Displaying genes 1661 – 1670 of 3161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.