Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | AFIC_001607 | B6JFZ2 | Positive | 1632429 - 1633187 | 25413.3 |
| preprotein translocase subunit secg | AFIC_001608 | Not Available | Positive | 1633308 - 1633661 | 11923.6 |
| ctp synthase | AFIC_001609 | A5EK18 | Positive | 1633838 - 1635469 | 60152.0 |
| hypothetical protein | AFIC_001610 | Not Available | Positive | 1635550 - 1636362 | 28640.4 |
| nipsnap family protein | AFIC_001611 | Not Available | Positive | 1636470 - 1636802 | 12730.1 |
| voc family protein | AFIC_001612 | Not Available | Positive | 1636817 - 1637707 | 32263.3 |
| 3-deoxy-8-phosphooctulonate synthase | AFIC_001613 | Q3SRK0 | Positive | 1637791 - 1638630 | 29008.1 |
| preq(1) synthase | AFIC_001614 | Q2IWC9 | Negative | 1638631 - 1639107 | 17680.4 |
| phosphopyruvate hydratase | AFIC_001615 | B6JFY2 | Positive | 1639258 - 1640541 | 45058.8 |
| nad(p)h-dependent oxidoreductase | AFIC_001616 | Q88FF8 | Positive | 1640683 - 1641246 | 19854.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
