Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | AFIC_001587 | B6JH72 | Positive | 1606615 - 1607802 | 41545.1 |
| rip metalloprotease rsep | AFIC_001588 | Q8UFL7 | Positive | 1607849 - 1608997 | 41507.5 |
| outer membrane protein assembly factor bama | AFIC_001589 | C6V5K2 | Positive | 1609240 - 1611621 | 86912.8 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | AFIC_001590 | Q1QMM8 | Positive | 1611796 - 1612845 | 35747.6 |
| 3-hydroxyacyl-acp dehydratase fabz | AFIC_001591 | Q215D9 | Positive | 1612845 - 1613303 | 16875.6 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | AFIC_001592 | A8I491 | Positive | 1613308 - 1614108 | 27768.3 |
| udp-2,3-diacylglucosamine diphosphatase lpxi | AFIC_001593 | Q9A716 | Positive | 1614120 - 1614974 | 29987.4 |
| lipid-a-disaccharide synthase | AFIC_001594 | Q1QMM4 | Positive | 1614992 - 1616164 | 42972.2 |
| methyl-accepting chemotaxis protein | AFIC_001595 | P50466 | Positive | 1616375 - 1618066 | 60485.4 |
| citrate synthase | AFIC_001596 | P94325 | Negative | 1618144 - 1619448 | 48322.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
