Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3551 domain-containing protein | AFIC_001577 | Not Available | Negative | 1594127 - 1594516 | 14572.6 |
| duf3551 domain-containing protein | AFIC_001578 | Not Available | Negative | 1594549 - 1594809 | 9626.29 |
| dna polymerase iii subunit alpha | AFIC_001579 | Q9A700 | Positive | 1595331 - 1598798 | 126686.0 |
| caspase family protein | AFIC_001580 | Not Available | Positive | 1598928 - 1601333 | 85102.4 |
| 30s ribosomal protein s2 | AFIC_001581 | B6JH66 | Positive | 1601576 - 1602574 | 35828.7 |
| translation elongation factor ts | AFIC_001582 | A4YVG5 | Positive | 1602693 - 1603616 | 31769.2 |
| ump kinase | AFIC_001583 | Q215E7 | Positive | 1603659 - 1604375 | 24887.1 |
| ribosome recycling factor | AFIC_001584 | B6JH69 | Positive | 1604392 - 1604955 | 20803.1 |
| isoprenyl transferase | AFIC_001585 | Q89KP7 | Positive | 1604965 - 1605723 | 27779.0 |
| phosphatidate cytidylyltransferase | AFIC_001586 | Q8YHH2 | Positive | 1605732 - 1606574 | 29879.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
