Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2946 domain-containing protein | AFIC_001567 | Not Available | Positive | 1582389 - 1582754 | 12921.8 |
| tonb-dependent receptor | AFIC_001568 | P76115 | Positive | 1582836 - 1585241 | 85875.0 |
| glycoside hydrolase | AFIC_001569 | Not Available | Positive | 1585253 - 1586458 | 43020.5 |
| tlpa family protein disulfide reductase | AFIC_001570 | P80579 | Positive | 1586467 - 1586970 | 18370.2 |
| copper chaperone pcu(a)c | AFIC_001571 | Q6ACU3 | Positive | 1586967 - 1587518 | 19325.8 |
| tonb-dependent receptor plug domain-containing protein | AFIC_001572 | Not Available | Negative | 1587595 - 1589661 | 75825.3 |
| hypothetical protein | AFIC_001573 | Not Available | Negative | 1590055 - 1590432 | 13403.3 |
| proline--trna ligase | AFIC_001574 | B6JH58 | Positive | 1590665 - 1592002 | 50336.5 |
| lipoprotein-releasing abc transporter permease subunit | AFIC_001575 | P57061 | Positive | 1592142 - 1593410 | 46305.0 |
| abc transporter atp-binding protein | AFIC_001576 | Q89KN0 | Positive | 1593419 - 1594117 | 25335.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
