Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | AFIC_001537 | B6JGU6 | Positive | 1551992 - 1553350 | 50411.4 |
| atp-dependent clp protease proteolytic subunit | AFIC_001538 | B6JGU7 | Positive | 1553543 - 1554175 | 23423.4 |
| atp-dependent clp protease atp-binding subunit clpx | AFIC_001539 | B6JGU8 | Positive | 1554554 - 1555828 | 46603.1 |
| cytochrome ubiquinol oxidase subunit i | AFIC_001540 | A8HYF7 | Positive | 1556147 - 1558498 | 86341.9 |
| Trna-val | Not Available | Not Available | Positive | 1559042 - 1559118 | Not Available |
| peptidase t | AFIC_001542 | Q8R922 | Negative | 1559498 - 1560751 | 45621.4 |
| hu family dna-binding protein | AFIC_001543 | Q9XB21 | Negative | 1560969 - 1561268 | 10732.5 |
| Trna-asp | Not Available | Not Available | Positive | 1561491 - 1561567 | Not Available |
| hypothetical protein | AFIC_001545 | Not Available | Positive | 1561778 - 1562074 | 10714.9 |
| tartrate dehydrogenase | AFIC_001546 | P76251 | Positive | 1562260 - 1563351 | 39697.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
