Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001527 | Not Available | Positive | 1543344 - 1543565 | 8137.84 |
| antibiotic biosynthesis monooxygenase | AFIC_001528 | O31484 | Positive | 1543642 - 1543938 | 11546.8 |
| ai-2e family transporter | AFIC_001529 | O32095 | Negative | 1543946 - 1545076 | 39352.5 |
| rrf2 family transcriptional regulator | AFIC_001530 | P71036 | Positive | 1545229 - 1545678 | 16342.1 |
| nad(p)/fad-dependent oxidoreductase | AFIC_001531 | M1W428 | Positive | 1545675 - 1546559 | 31176.1 |
| type i glutamate--ammonia ligase | AFIC_001532 | P05457 | Negative | 1546656 - 1548065 | 52547.7 |
| p-ii family nitrogen regulator | AFIC_001533 | P14179 | Negative | 1548157 - 1548495 | 12308.0 |
| nad(p)h-hydrate dehydratase | AFIC_001534 | Q2RGI2 | Positive | 1548780 - 1550279 | 51386.9 |
| multicopper oxidase domain-containing protein | AFIC_001535 | Not Available | Negative | 1550276 - 1551601 | 47983.6 |
| Trna-leu | Not Available | Not Available | Positive | 1551747 - 1551831 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
