Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AFIC_001517 | Not Available | Negative | 1534492 - 1535685 | 43766.8 |
| duf2842 domain-containing protein | AFIC_001518 | Not Available | Negative | 1535811 - 1536026 | 7750.95 |
| cox15/ctaa family protein | AFIC_001519 | Q3SSR2 | Positive | 1536132 - 1537226 | 40623.6 |
| ftr1 family protein | AFIC_001520 | P39595 | Positive | 1537330 - 1538136 | 28769.7 |
| o-acetylhomoserine aminocarboxypropyltransferase | AFIC_001521 | Q9WZY4 | Negative | 1538210 - 1539496 | 45983.6 |
| coa-binding protein | AFIC_001522 | P75874 | Negative | 1539539 - 1540138 | 21439.0 |
| paai family thioesterase | AFIC_001523 | Q9NPJ3 | Positive | 1540259 - 1540690 | 15063.3 |
| 50s ribosomal protein l13 | AFIC_001524 | B6JGT5 | Positive | 1540839 - 1541303 | 17130.0 |
| 30s ribosomal protein s9 | AFIC_001525 | B6JGT6 | Positive | 1541303 - 1541779 | 17343.1 |
| ggdef domain-containing protein | AFIC_001526 | P54595 | Positive | 1542030 - 1543283 | 44222.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
