Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | AFIC_001507 | P30791 | Positive | 1522033 - 1522755 | 26366.9 |
| acyltransferase | AFIC_001508 | Q8Y7I6 | Positive | 1522960 - 1524894 | 70571.4 |
| Trna-pro | Not Available | Not Available | Positive | 1524996 - 1525073 | Not Available |
| hypothetical protein | AFIC_001510 | Not Available | Positive | 1525248 - 1525688 | 14667.0 |
| glycosyltransferase family 9 protein | AFIC_001511 | Q9R9D5 | Positive | 1525847 - 1526950 | 40029.6 |
| lps export abc transporter permease lptf | AFIC_001512 | Q9ZC95 | Positive | 1526956 - 1528149 | 43748.3 |
| hypothetical protein | AFIC_001513 | Not Available | Negative | 1528138 - 1529406 | 46684.9 |
| undecaprenyl-phosphate glucose phosphotransferase | AFIC_001514 | P71241 | Negative | 1529429 - 1530979 | 58453.3 |
| glycosyltransferase family 4 protein | AFIC_001515 | P9WMY8 | Negative | 1531066 - 1532196 | 40740.7 |
| exopolysaccharide transport family protein | AFIC_001516 | P33698 | Positive | 1532316 - 1534445 | 77029.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
