Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AFIC_001497 | O34817 | Negative | 1514031 - 1514780 | 28106.9 |
| carboxymuconolactone decarboxylase family protein | AFIC_001498 | P20370 | Positive | 1514916 - 1515329 | 15034.2 |
| nad(p)-dependent oxidoreductase | AFIC_001499 | P0ABQ3 | Positive | 1515344 - 1516243 | 31436.3 |
| abc transporter substrate-binding protein | AFIC_001500 | Not Available | Positive | 1516289 - 1517293 | 36412.2 |
| outer membrane protein assembly factor bame | AFIC_001501 | Q8PAL4 | Negative | 1517457 - 1517933 | 17524.2 |
| ubiquinol-cytochrome c chaperone family protein | AFIC_001502 | Q9W6I0 | Positive | 1518065 - 1518601 | 19676.4 |
| duf177 domain-containing protein | AFIC_001503 | Not Available | Positive | 1518606 - 1519187 | 20453.9 |
| phosphate acyltransferase plsx | AFIC_001504 | B6JGR6 | Positive | 1519374 - 1520435 | 37459.4 |
| ketoacyl-acp synthase iii | AFIC_001505 | A4YW84 | Positive | 1520441 - 1521409 | 34152.7 |
| integration host factor subunit alpha | AFIC_001506 | B6JGR8 | Positive | 1521539 - 1521883 | 12260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
