Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1489 domain-containing protein | AFIC_001406 | Not Available | Positive | 1422020 - 1422457 | 16548.5 |
| pantoate--beta-alanine ligase | AFIC_001407 | Q2IXG7 | Negative | 1422471 - 1423328 | 31340.2 |
| alpha/beta hydrolase | AFIC_001408 | Not Available | Positive | 1423569 - 1424471 | 33092.8 |
| dnaj domain-containing protein | AFIC_001409 | Q54QN1 | Positive | 1424535 - 1425269 | 26138.8 |
| spor domain-containing protein | AFIC_001410 | P0AEB4 | Negative | 1425492 - 1427285 | 63275.5 |
| phasin family protein | AFIC_001411 | Not Available | Positive | 1427672 - 1428004 | 12295.3 |
| pilus assembly protein | AFIC_001412 | Not Available | Negative | 1428102 - 1429886 | 63706.6 |
| atp-dependent clp protease adapter clps | AFIC_001413 | Q6N535 | Positive | 1430236 - 1430646 | 15493.9 |
| cytochrome ubiquinol oxidase subunit i | AFIC_001414 | P05444 | Positive | 1430882 - 1433122 | 82155.5 |
| hypothetical protein | AFIC_001415 | Not Available | Negative | 1433300 - 1433614 | 11149.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
