Sphingomonas cannabina DM2-R-LB4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas cannabina DM2-R-LB4 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility in various environments. This species has been cataloged with a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability. The accession number for Sphingomonas cannabina DM2-R-LB4 is CP090059.1, which provides a reference for researchers seeking to access its genomic information. The presence of flagella suggests that Sphingomonas cannabina DM2-R-LB4 has the capability to move towards beneficial environments or away from harmful conditions, which is a crucial trait for survival in diverse habitats. The rod shape may also enhance its ability to traverse various substrates and interact with other microorganisms. From an ecological perspective, the traits of Sphingomonas cannabina DM2-R-LB4 could play a significant role in its interactions within microbial communities. Its motility and specific morphology may allow it to colonize unique niches, potentially contributing to nutrient cycling or bioremediation processes. The streamlined genomic structure could also indicate a specialization that allows it to thrive in particular environments, making it an interesting subject for further studies in microbial ecology and adaptability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas cannabina
StrainDM2-R-LB4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas cannabina DM2-R-LB4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas cannabina DM2-R-LB4, Complete Genome

Gene Summary

Adenine Count

704232 bp

Thymine Count

705652 bp

Guanine Count

1489166 bp

Cytosine Count

1487121 bp

Genome Length

4386171 bp

Protein-coding Genes

3973 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aquaporin family proteinLZK98_03960Q92R43Negative808242 - 80890722164.3
metalloregulator arsr/smtb family transcription factorLZK98_03965P28267Negative808904 - 80925111968.8
hnh endonucleaseLZK98_03970Not AvailableNegative809543 - 81010922028.2
glutamyl-q trna(asp) synthetaseLZK98_03975O68142Positive810214 - 81126637775.5
twin transmembrane helix small proteinLZK98_03980Not AvailablePositive811276 - 8115098281.77
cob(i)yrinic acid a,c-diamide adenosyltransferaseLZK98_03985P64804Positive811511 - 81205618469.0
ergothioneine biosynthesis protein egtbLZK98_03990G7CFI3Positive812109 - 81342848328.6
l-histidine n(alpha)-methyltransferaseLZK98_03995A0R5M8Positive813550 - 81452735808.9
3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing proteinLZK98_04000Q45223Positive814685 - 81555430746.3
l,d-transpeptidase family proteinLZK98_04005Q8NMT9Positive815663 - 81633123174.2

Displaying genes 901 – 910 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.