Sphingomonas cannabina DM2-R-LB4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas cannabina DM2-R-LB4 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility in various environments. This species has been cataloged with a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability. The accession number for Sphingomonas cannabina DM2-R-LB4 is CP090059.1, which provides a reference for researchers seeking to access its genomic information. The presence of flagella suggests that Sphingomonas cannabina DM2-R-LB4 has the capability to move towards beneficial environments or away from harmful conditions, which is a crucial trait for survival in diverse habitats. The rod shape may also enhance its ability to traverse various substrates and interact with other microorganisms. From an ecological perspective, the traits of Sphingomonas cannabina DM2-R-LB4 could play a significant role in its interactions within microbial communities. Its motility and specific morphology may allow it to colonize unique niches, potentially contributing to nutrient cycling or bioremediation processes. The streamlined genomic structure could also indicate a specialization that allows it to thrive in particular environments, making it an interesting subject for further studies in microbial ecology and adaptability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas cannabina
StrainDM2-R-LB4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas cannabina DM2-R-LB4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas cannabina DM2-R-LB4, Complete Genome

Gene Summary

Adenine Count

704232 bp

Thymine Count

705652 bp

Guanine Count

1489166 bp

Cytosine Count

1487121 bp

Genome Length

4386171 bp

Protein-coding Genes

3973 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system vapc family toxinLZK98_01320Not AvailablePositive257866 - 25828515091.9
thymidine kinaseLZK98_01325Q2G5F0Positive258285 - 25889921907.3
m3 family metallopeptidaseLZK98_01330P24171Negative258905 - 26104080022.5
protein imuaLZK98_01335Q9A3J1Positive261285 - 26194723004.6
dna polymerase y family proteinLZK98_01340Q9A3J2Positive262204 - 26364953307.4
error-prone dna polymeraseLZK98_01345Q92ZJ6Positive263646 - 266945122329.0
glycosyltransferase family 2 proteinLZK98_01350Q8U4M3Positive267067 - 26821541571.3
glycosyl hydrolase family 28 proteinLZK98_01355A7PZL3Positive268250 - 26964749578.5
duf2189 domain-containing proteinLZK98_01360Not AvailablePositive269723 - 27051127774.4
na+/h+ antiporter nhaaLZK98_01365Q2GBB8Negative270518 - 27174742407.3

Displaying genes 391 – 400 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.