Sphingomonas cannabina DM2-R-LB4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas cannabina DM2-R-LB4 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility in various environments. This species has been cataloged with a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability. The accession number for Sphingomonas cannabina DM2-R-LB4 is CP090059.1, which provides a reference for researchers seeking to access its genomic information. The presence of flagella suggests that Sphingomonas cannabina DM2-R-LB4 has the capability to move towards beneficial environments or away from harmful conditions, which is a crucial trait for survival in diverse habitats. The rod shape may also enhance its ability to traverse various substrates and interact with other microorganisms. From an ecological perspective, the traits of Sphingomonas cannabina DM2-R-LB4 could play a significant role in its interactions within microbial communities. Its motility and specific morphology may allow it to colonize unique niches, potentially contributing to nutrient cycling or bioremediation processes. The streamlined genomic structure could also indicate a specialization that allows it to thrive in particular environments, making it an interesting subject for further studies in microbial ecology and adaptability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas cannabina
StrainDM2-R-LB4

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas cannabina DM2-R-LB4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas cannabina DM2-R-LB4, Complete Genome

Gene Summary

Adenine Count

704232 bp

Thymine Count

705652 bp

Guanine Count

1489166 bp

Cytosine Count

1487121 bp

Genome Length

4386171 bp

Protein-coding Genes

3973 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorLZK98_14745P17315Negative3102950 - 310564397393.2
sis domain-containing proteinLZK98_14750Q5NRH4Positive3106028 - 310705935921.0
n-acetylglucosamine-6-phosphate deacetylaseLZK98_14755A0KYQ5Positive3107059 - 310824340802.3
nipsnap family proteinLZK98_14760Not AvailablePositive3108331 - 310876216078.2
aldose 1-epimerase family proteinLZK98_14765Not AvailablePositive3108940 - 311011843831.7
sdr family oxidoreductaseLZK98_14770Q988B7Positive3110246 - 311099226000.2
coa transferaseLZK98_14775Q68FU4Positive3111006 - 311219642595.7
enoyl-coa hydratase/isomerase family proteinLZK98_14780Q9KJE7Positive3112209 - 311297927183.7
d-glycerate dehydrogenaseLZK98_14785Q9UYR1Positive3112992 - 311394834120.2
right-handed parallel beta-helix repeat-containing proteinLZK98_14790Not AvailableNegative3113988 - 311599472630.6

Displaying genes 2951 – 2960 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.