Frateuria edaphi 5GH9-34

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Frateuria

Description

Frateuria edaphi 5GH9-34 is characterized by having a single replicon, indicating a streamlined genetic organization typical of certain bacterial species. The strain is cataloged under the accession number CP088251.1, which provides a reference for its genomic sequence in biological databases. The single replicon structure may contribute to its adaptability and survival in various environments, suggesting that Frateuria edaphi 5GH9-34 could exhibit a level of ecological versatility. This trait is often associated with organisms that thrive in specific niches, where efficient replication and resource utilization are advantageous. The ecological insights into Frateuria edaphi 5GH9-34 could include its potential role in soil microbiomes, as members of the Frateuria genus are generally known for their interactions in terrestrial environments. The presence of this strain in soil ecosystems may have implications for nutrient cycling and soil health, although specific interactions and functions remain to be elucidated. Overall, the genomic and structural traits of Frateuria edaphi 5GH9-34 hint at its potential ecological roles, underscoring the importance of further research into its biological functions and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusFrateuria
SpeciesFrateuria edaphi
Strain5GH9-34

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frateuria edaphi 5GH9-34, Complete Genome

Gene Summary

Adenine Count

609952 bp

Thymine Count

602633 bp

Guanine Count

1275409 bp

Cytosine Count

1281409 bp

Genome Length

3769403 bp

Protein-coding Genes

3362 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar basal body p-ring formation protein flgaLQ772_03275Q56892Negative735436 - 73613124143.4
methyl-accepting chemotaxis proteinLQ772_03280Q9I3S1Negative736131 - 73743545542.6
chemotaxis proteinLQ772_03285O25337Positive737638 - 73856733428.8
flagellar basal body rod protein flgbLQ772_03290B4EYN9Positive738768 - 73917214115.6
flagellar basal body rod protein flgcLQ772_03295P0A1I8Positive739172 - 73959414860.3
flagellar hook capping proteinLQ772_03300P75936Positive739604 - 74024821756.5
flagellar hook protein flgeLQ772_03305P0A1J2Positive740292 - 74151241725.1
flagellar basal-body rod protein flgfLQ772_03310P16323Positive741534 - 74227425213.9
flagellar basal-body rod protein flggLQ772_03315P0A1J4Positive742292 - 74307727510.2
flagellar basal body l-ring protein flghLQ772_03320Q5R0P9Positive743089 - 74376624064.5

Displaying genes 741 – 750 of 3469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.