Staphylococcus ratti NRL/St 03/464

Coccusfacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus ratti NRL/St 03/464 is a Gram-positive coccus that typically arranges itself in pairs. This bacterium is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic conditions. It has been observed to possess flagella, which may contribute to its motility, although the ecological implications of this feature in its natural habitat have not been detailed. This strain has three replicons, indicating a relatively complex genomic structure, which could play a role in its adaptability and survival in various environments. Staphylococcus ratti NRL/St 03/464 is primarily associated with the host Rattus norvegicus, commonly known as the brown rat. Its nonsporulating nature suggests that it relies on other survival mechanisms rather than forming spores, which is a characteristic often found in some bacterial species that enables them to withstand harsh conditions. The accessions for this strain are CP086654.1, CP086655.1, and CP086656.1, which may provide further insights into its genetic and phenotypic characteristics upon detailed analysis. Understanding the traits of Staphylococcus ratti NRL/St 03/464, particularly its association with Rattus norvegicus, may offer significant insights into its role in the microbiome of this host and its potential implications in health and disease contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus ratti
StrainNRL/St 03/464

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Staphylococcus ratti NRL/St 03/464
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rattus norvegicus
Cell arrangementPairs
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus ratti NRL/St 03/464, Complete Genome

Gene Summary

Adenine Count

741283 bp

Thymine Count

738661 bp

Guanine Count

419800 bp

Cytosine Count

417827 bp

Genome Length

2317571 bp

Protein-coding Genes

2126 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3021 domain-containing proteinLN051_00685Not AvailableNegative157688 - 15814017390.0
lyttr family transcriptional regulatorLN051_00690Q2FED3Negative158137 - 15857717040.7
dethiobiotin synthaseLN051_00695Q5HKF0Positive158791 - 15948326106.2
adenosylmethionine--8-amino-7-oxononanoate transaminaseLN051_00700Q2FVJ6Positive159458 - 16080450591.6
pyridoxal phosphate-dependent aminotransferase family proteinLN051_00705B5YFU5Positive160810 - 16192241798.3
6-carboxyhexanoate--coa ligaseLN051_00710Q6GE10Positive161915 - 16259525855.9
l-lactate permeaseLN051_00715Q57251Negative162648 - 16424056206.5
is6 family transposaseLN051_00720Q4L9P0Positive165445 - 171840207600.0
lpxtg cell wall anchor domain-containing proteinLN051_00725Not AvailablePositive173725 - 17403910439.0
accessory sec system protein translocase subunit secy2LN051_00730Q4L9N9Positive174151 - 17537446956.2

Displaying genes 211 – 220 of 2282 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.