Staphylococcus ratti NRL/St 03/464

Coccusfacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus ratti NRL/St 03/464 is a Gram-positive coccus that typically arranges itself in pairs. This bacterium is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic conditions. It has been observed to possess flagella, which may contribute to its motility, although the ecological implications of this feature in its natural habitat have not been detailed. This strain has three replicons, indicating a relatively complex genomic structure, which could play a role in its adaptability and survival in various environments. Staphylococcus ratti NRL/St 03/464 is primarily associated with the host Rattus norvegicus, commonly known as the brown rat. Its nonsporulating nature suggests that it relies on other survival mechanisms rather than forming spores, which is a characteristic often found in some bacterial species that enables them to withstand harsh conditions. The accessions for this strain are CP086654.1, CP086655.1, and CP086656.1, which may provide further insights into its genetic and phenotypic characteristics upon detailed analysis. Understanding the traits of Staphylococcus ratti NRL/St 03/464, particularly its association with Rattus norvegicus, may offer significant insights into its role in the microbiome of this host and its potential implications in health and disease contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus ratti
StrainNRL/St 03/464

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Staphylococcus ratti NRL/St 03/464
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rattus norvegicus
Cell arrangementPairs
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus ratti NRL/St 03/464, Complete Genome

Gene Summary

Adenine Count

741283 bp

Thymine Count

738661 bp

Guanine Count

419800 bp

Cytosine Count

417827 bp

Genome Length

2317571 bp

Protein-coding Genes

2126 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2538 family proteinLN051_07985P0A0Q1Positive1665261 - 166573118200.6
gnat family n-acetyltransferaseLN051_07990P0A0M9Positive1665880 - 166630216151.2
n-acetylmuramoyl-l-alanine amidaseLN051_07995Q8NX96Positive1666487 - 1670242136803.0
acyltransferase family proteinLN051_08000O31660Positive1670365 - 167137238839.1
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeLN051_08005P16524Positive1671442 - 167260843207.0
1,4-dihydroxy-2-naphthoyl-coa synthaseLN051_08010Q49WG8Negative1672905 - 167372330361.2
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseLN051_08015P23974Negative1673689 - 167453131973.4
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseLN051_08020Q5HQC5Negative1674518 - 167619163390.8
isochorismate synthaseLN051_08025P23973Negative1676193 - 167754551580.5
1,4-dihydroxy-2-naphthoate polyprenyltransferaseLN051_08030P39582Positive1677717 - 167865534901.1

Displaying genes 1671 – 1680 of 2282 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.