Staphylococcus ratti NRL/St 03/464

Coccusfacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus ratti NRL/St 03/464 is a Gram-positive coccus that typically arranges itself in pairs. This bacterium is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic conditions. It has been observed to possess flagella, which may contribute to its motility, although the ecological implications of this feature in its natural habitat have not been detailed. This strain has three replicons, indicating a relatively complex genomic structure, which could play a role in its adaptability and survival in various environments. Staphylococcus ratti NRL/St 03/464 is primarily associated with the host Rattus norvegicus, commonly known as the brown rat. Its nonsporulating nature suggests that it relies on other survival mechanisms rather than forming spores, which is a characteristic often found in some bacterial species that enables them to withstand harsh conditions. The accessions for this strain are CP086654.1, CP086655.1, and CP086656.1, which may provide further insights into its genetic and phenotypic characteristics upon detailed analysis. Understanding the traits of Staphylococcus ratti NRL/St 03/464, particularly its association with Rattus norvegicus, may offer significant insights into its role in the microbiome of this host and its potential implications in health and disease contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus ratti
StrainNRL/St 03/464

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Staphylococcus ratti NRL/St 03/464
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rattus norvegicus
Cell arrangementPairs
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus ratti NRL/St 03/464, Complete Genome

Gene Summary

Adenine Count

741283 bp

Thymine Count

738661 bp

Guanine Count

419800 bp

Cytosine Count

417827 bp

Genome Length

2317571 bp

Protein-coding Genes

2126 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold shock protein cspaLN051_06335Q5HPE0Positive1300462 - 13006627351.53
diaminopimelate decarboxylaseLN051_06340Q5HG20Negative1300826 - 130209147056.3
alanine racemaseLN051_06345Q9EZ08Negative1302091 - 130316140879.7
m20 family metallopeptidaseLN051_06350Q49XK0Negative1303164 - 130431243841.7
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferaseLN051_06355B9DP25Negative1304493 - 130521225402.5
4-hydroxy-tetrahydrodipicolinate reductaseLN051_06360B9DP24Negative1305229 - 130595126857.2
4-hydroxy-tetrahydrodipicolinate synthaseLN051_06365Q49XJ7Negative1305948 - 130682632497.5
aspartate-semialdehyde dehydrogenaseLN051_06370O67716Negative1306849 - 130783236309.5
atp-binding cassette domain-containing proteinLN051_06375O31716Negative1308720 - 131032760592.9
rna-binding proteinLN051_06380Q4L695Positive1310485 - 131138734559.4

Displaying genes 1341 – 1350 of 2282 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.