Staphylococcus ratti NRL/St 03/464

Coccusfacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus ratti NRL/St 03/464 is a Gram-positive coccus that typically arranges itself in pairs. This bacterium is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic conditions. It has been observed to possess flagella, which may contribute to its motility, although the ecological implications of this feature in its natural habitat have not been detailed. This strain has three replicons, indicating a relatively complex genomic structure, which could play a role in its adaptability and survival in various environments. Staphylococcus ratti NRL/St 03/464 is primarily associated with the host Rattus norvegicus, commonly known as the brown rat. Its nonsporulating nature suggests that it relies on other survival mechanisms rather than forming spores, which is a characteristic often found in some bacterial species that enables them to withstand harsh conditions. The accessions for this strain are CP086654.1, CP086655.1, and CP086656.1, which may provide further insights into its genetic and phenotypic characteristics upon detailed analysis. Understanding the traits of Staphylococcus ratti NRL/St 03/464, particularly its association with Rattus norvegicus, may offer significant insights into its role in the microbiome of this host and its potential implications in health and disease contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus ratti
StrainNRL/St 03/464

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Staphylococcus ratti NRL/St 03/464
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rattus norvegicus
Cell arrangementPairs
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus ratti NRL/St 03/464, Complete Genome

Gene Summary

Adenine Count

741283 bp

Thymine Count

738661 bp

Guanine Count

419800 bp

Cytosine Count

417827 bp

Genome Length

2317571 bp

Protein-coding Genes

2126 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtpase eraLN051_05585A7X2W5Positive1150541 - 115143734042.6
dna repair protein recoLN051_05590Q49Y09Positive1151460 - 115223929893.6
glycine--trna ligaseLN051_05595Q5HNY2Negative1152364 - 115375553758.1
helix-turn-helix transcriptional regulatorLN051_05600O34994Positive1154177 - 115480023160.3
kinase/pyrophosphorylaseLN051_05605B9DNM2Positive1154815 - 115563931280.9
dna primaseLN051_05610Q5HNY6Positive1155710 - 115749469512.6
rna polymerase sigma factor rpodLN051_05615Q5HNY7Positive1157512 - 115862142345.5
trna (adenine(22)-n(1))-methyltransferase trmkLN051_05620P54471Positive1158812 - 115948925873.4
nif3-like dinuclear metal center hexameric proteinLN051_05625Q5HNY9Positive1159486 - 116058640648.6
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseLN051_05630B9E6U8Negative1160633 - 116160135622.8

Displaying genes 1191 – 1200 of 2282 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.