Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix litoralis |
| Strain | AS |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1014323 bp
Thymine Count
1006644 bp
Guanine Count
1128639 bp
Cytosine Count
1135237 bp
Genome Length
4284843 bp
Protein-coding Genes
4103 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system secretin gspd | J9253_02045 | P35818 | Negative | 419626 - 421701 | 72877.7 |
| duf1015 domain-containing protein | J9253_02050 | Not Available | Positive | 421887 - 423125 | 45314.7 |
| hypothetical protein | J9253_02055 | Not Available | Positive | 423221 - 423973 | 27364.7 |
| signal peptidase i | J9253_02060 | P26844 | Negative | 423970 - 424887 | 34291.4 |
| fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | J9253_02065 | Q7NWN9 | Positive | 424998 - 426209 | 43495.1 |
| hypothetical protein | J9253_02070 | Not Available | Negative | 426233 - 426667 | 15400.5 |
| hypothetical protein | J9253_02075 | Not Available | Negative | 426657 - 427100 | 16754.6 |
| cytochrome c5 family protein | J9253_02080 | P00123 | Positive | 427281 - 427937 | 21484.1 |
| sulfur globule family protein | J9253_02085 | Not Available | Negative | 428000 - 428545 | 19051.4 |
| Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 428722 - 429086 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
