Sphingomonas radiodurans S9-5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas radiodurans S9-5 is a rod-shaped bacterium notable for its presence on the north slope of Mount Everest. This unique habitat suggests its ability to withstand extreme environmental conditions, which may be indicative of its ecological adaptations. The organism possesses true flagella, enabling motility, which can be advantageous for navigating its challenging habitat. Sphingomonas radiodurans S9-5 has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and adaptation. The specific genetic information for this strain can be accessed through the accession number CP086594.1, which serves as a valuable resource for researchers studying its characteristics and potential applications. The ecological insight provided by the presence of Sphingomonas radiodurans S9-5 in such an extreme environment highlights the resilience of certain microbial life forms. This bacterium may play a role in biogeochemical cycles in alpine ecosystems, contributing to nutrient cycling and influencing microbial community dynamics in high-altitude environments. Its unique adaptations could also make it a subject of interest for biotechnological applications, particularly in areas requiring stress tolerance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas radiodurans
StrainS9-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas radiodurans S9-5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnorth slope of Mount Everest
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas radiodurans S9-5, Complete Genome

Gene Summary

Adenine Count

632744 bp

Thymine Count

627186 bp

Guanine Count

1192406 bp

Cytosine Count

1225857 bp

Genome Length

3678193 bp

Protein-coding Genes

3438 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome maturation protein rimpLLW23_07680Q1GVJ2Negative1592797 - 159334820028.5
aac(3)-i family aminoglycoside n-acetyltransferaseLLW23_07685P23181Negative1593490 - 159393616123.3
lmo0937 family membrane proteinLLW23_07690Not AvailablePositive1594123 - 15942665123.86
dihydrolipoamide acetyltransferase family proteinLLW23_07695Q9I1M0Negative1594307 - 159562646955.9
alpha-ketoacid dehydrogenase subunit betaLLW23_07700Q9I1M1Negative1595633 - 159663736192.6
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alphaLLW23_07705Q9I1M2Negative1596882 - 159816847465.8
protein imuaLLW23_07710Q9A3J1Positive1598361 - 159911326525.1
dna polymerase y family proteinLLW23_07715Q9A3J2Positive1599025 - 160137384968.2
type ii toxin-antitoxin system vapc family toxinLLW23_07720P71623Negative1601417 - 160182114534.6
prevent-host-death proteinLLW23_07725Not AvailableNegative1601818 - 160211711188.4

Displaying genes 1551 – 1560 of 1680 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.