Sphingomonas radiodurans S9-5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas radiodurans S9-5 is a rod-shaped bacterium notable for its presence on the north slope of Mount Everest. This unique habitat suggests its ability to withstand extreme environmental conditions, which may be indicative of its ecological adaptations. The organism possesses true flagella, enabling motility, which can be advantageous for navigating its challenging habitat. Sphingomonas radiodurans S9-5 has a single replicon, indicating a streamlined genomic structure that may contribute to its efficiency in replication and adaptation. The specific genetic information for this strain can be accessed through the accession number CP086594.1, which serves as a valuable resource for researchers studying its characteristics and potential applications. The ecological insight provided by the presence of Sphingomonas radiodurans S9-5 in such an extreme environment highlights the resilience of certain microbial life forms. This bacterium may play a role in biogeochemical cycles in alpine ecosystems, contributing to nutrient cycling and influencing microbial community dynamics in high-altitude environments. Its unique adaptations could also make it a subject of interest for biotechnological applications, particularly in areas requiring stress tolerance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas radiodurans
StrainS9-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas radiodurans S9-5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnorth slope of Mount Everest
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas radiodurans S9-5, Complete Genome

Gene Summary

Adenine Count

632744 bp

Thymine Count

627186 bp

Guanine Count

1192406 bp

Cytosine Count

1225857 bp

Genome Length

3678193 bp

Protein-coding Genes

3438 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinLLW23_00780Not AvailableNegative161527 - 16213521522.5
type vi secretion system tip protein tssi/vgrgLLW23_00785K7WKL8Negative162146 - 16403269415.1
type vi secretion system tube protein hcpLLW23_00790Q9I747Negative164088 - 16455816486.3
type vi secretion system atpase tsshLLW23_00795Q9I742Negative164645 - 16737497929.4
type vi secretion system baseplate subunit tssgLLW23_00800Not AvailableNegative167526 - 16861438623.5
type vi secretion system baseplate subunit tssfLLW23_00805Q9I744Negative168611 - 17042566642.5
type vi secretion system baseplate subunit tsseLLW23_00810Not AvailableNegative170422 - 17089517642.8
type vi secretion system contractile sheath large subunitLLW23_00815Q9I748Negative170895 - 17234953855.6
type vi secretion system contractile sheath large subunitLLW23_00820Q9I748Negative172378 - 17387455285.3
type vi secretion system contractile sheath small subunitLLW23_00825Q9I749Negative173879 - 17439119490.5

Displaying genes 171 – 180 of 1680 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.