Geomonas oryzisoli RG10

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geomonas

Description

Geomonas oryzisoli RG10 is a bacterial strain characterized by having a single replicon and is recorded under the accession number CP076723.1. This taxon is noteworthy due to its specific ecological niche, which suggests a potential role in its native environment. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in resource utilization within its habitat. The reference accession provides a genetic basis for further studies, allowing researchers to explore its metabolic pathways, interactions, and potential applications. Understanding the traits of Geomonas oryzisoli RG10 can lead to insights into its ecological roles, particularly in relation to soil microbiomes. Given its association with rice paddy soil, it may play a crucial role in nutrient cycling or plant growth promotion, contributing to agricultural sustainability. Further investigations into its genomic features and functions could illuminate its contributions to soil health and crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeomonas
SpeciesGeomonas oryzisoli
StrainRG10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomonas oryzisoli RG10, Complete Genome

Gene Summary

Adenine Count

919647 bp

Thymine Count

933329 bp

Guanine Count

1501514 bp

Cytosine Count

1491975 bp

Genome Length

4846465 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system phd/yefm family antitoxinKP004_04160Q9Z4V7Positive941079 - 9413218555.24
(deoxy)nucleoside triphosphate pyrophosphohydrolaseKP004_04165P77788Positive941318 - 94171314882.0
hdod domain-containing proteinKP004_04170O83112Negative941793 - 94262331138.8
trna 2-thiouridine(34) synthase mnmaKP004_04175A1AQ29Positive942836 - 94390038774.7
recombination-associated protein rdgcKP004_04180Not AvailableNegative944037 - 94523345021.6
hypothetical proteinKP004_04185Q1PW30Negative945347 - 94661846937.8
hypothetical proteinKP004_04190Not AvailableNegative946618 - 94774540069.4
duf503 domain-containing proteinKP004_04195P32730Positive948005 - 94828610655.0
efflux rnd transporter periplasmic adaptor subunitKP004_04200P58411Positive948364 - 94958142922.8
abc transporter atp-binding proteinKP004_04205O34979Positive949584 - 95027325241.5

Displaying genes 831 – 840 of 4210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.