Geomonas oryzisoli RG10

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geomonas

Description

Geomonas oryzisoli RG10 is a bacterial strain characterized by having a single replicon and is recorded under the accession number CP076723.1. This taxon is noteworthy due to its specific ecological niche, which suggests a potential role in its native environment. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in resource utilization within its habitat. The reference accession provides a genetic basis for further studies, allowing researchers to explore its metabolic pathways, interactions, and potential applications. Understanding the traits of Geomonas oryzisoli RG10 can lead to insights into its ecological roles, particularly in relation to soil microbiomes. Given its association with rice paddy soil, it may play a crucial role in nutrient cycling or plant growth promotion, contributing to agricultural sustainability. Further investigations into its genomic features and functions could illuminate its contributions to soil health and crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeomonas
SpeciesGeomonas oryzisoli
StrainRG10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomonas oryzisoli RG10, Complete Genome

Gene Summary

Adenine Count

919647 bp

Thymine Count

933329 bp

Guanine Count

1501514 bp

Cytosine Count

1491975 bp

Genome Length

4846465 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretory system conjugative dna transfer family proteinKP004_20060Q00185Positive4604556 - 460693488667.8
hypothetical proteinKP004_20065Not AvailablePositive4606931 - 460740718369.0
alpa family phage regulatory proteinKP004_20070P12552Positive4607674 - 46079018504.45
eco57i restriction-modification methylase domain-containing proteinKP004_20075P05103Positive4607994 - 460971864360.4
paer7i family type ii restriction endonucleaseKP004_20080P05104Positive4609722 - 461046227040.3
hypothetical proteinKP004_20085Not AvailableNegative4610569 - 461169043877.4
hypothetical proteinKP004_20090Not AvailableNegative4611780 - 461221115831.5
integrase arm-type dna-binding domain-containing proteinKP004_20095P37317Negative4612560 - 461384048431.4
cytochrome c biogenesis protein ccdaKP004_20100Q2QY07Negative4614215 - 461490123638.6
thioredoxin family proteinKP004_20105O30974Negative4614898 - 461527513589.8

Displaying genes 4011 – 4020 of 4210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.