Geomonas oryzisoli RG10

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geomonas

Description

Geomonas oryzisoli RG10 is a bacterial strain characterized by having a single replicon and is recorded under the accession number CP076723.1. This taxon is noteworthy due to its specific ecological niche, which suggests a potential role in its native environment. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in resource utilization within its habitat. The reference accession provides a genetic basis for further studies, allowing researchers to explore its metabolic pathways, interactions, and potential applications. Understanding the traits of Geomonas oryzisoli RG10 can lead to insights into its ecological roles, particularly in relation to soil microbiomes. Given its association with rice paddy soil, it may play a crucial role in nutrient cycling or plant growth promotion, contributing to agricultural sustainability. Further investigations into its genomic features and functions could illuminate its contributions to soil health and crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeomonas
SpeciesGeomonas oryzisoli
StrainRG10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomonas oryzisoli RG10, Complete Genome

Gene Summary

Adenine Count

919647 bp

Thymine Count

933329 bp

Guanine Count

1501514 bp

Cytosine Count

1491975 bp

Genome Length

4846465 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminaseKP004_16010Q58466Negative3647975 - 364914443389.7
udp-n-acetylglucosamine 4,6-dehydratase (inverting)KP004_16015Q5QKR8Negative3649155 - 365016537814.7
lipopolysaccharide heptosyltransferase iKP004_16020P24173Negative3650538 - 365159038242.3
tetraacyldisaccharide 4'-kinaseKP004_16025C6E5B2Negative3651615 - 365267037082.4
3-deoxy-d-manno-octulosonic acid transferaseKP004_16030P0AC77Negative3652696 - 365400347119.6
lysophospholipid acyltransferase family proteinKP004_16035P0ACV1Negative3654140 - 365506634632.0
lipid a export permease/atp-binding protein msbaKP004_16040Q2LVL0Negative3655384 - 365712664457.4
lipid-a-disaccharide synthaseKP004_16045Q74AT9Negative3657123 - 365824140686.6
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseKP004_16050B3E4H5Negative3658353 - 365912927613.5
3-hydroxyacyl-acp dehydratase fabzKP004_16055A5G6H7Negative3659145 - 365957916033.9

Displaying genes 3201 – 3210 of 4210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.