Geomonas oryzisoli RG10

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geomonas

Description

Geomonas oryzisoli RG10 is a bacterial strain characterized by having a single replicon and is recorded under the accession number CP076723.1. This taxon is noteworthy due to its specific ecological niche, which suggests a potential role in its native environment. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in resource utilization within its habitat. The reference accession provides a genetic basis for further studies, allowing researchers to explore its metabolic pathways, interactions, and potential applications. Understanding the traits of Geomonas oryzisoli RG10 can lead to insights into its ecological roles, particularly in relation to soil microbiomes. Given its association with rice paddy soil, it may play a crucial role in nutrient cycling or plant growth promotion, contributing to agricultural sustainability. Further investigations into its genomic features and functions could illuminate its contributions to soil health and crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeomonas
SpeciesGeomonas oryzisoli
StrainRG10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomonas oryzisoli RG10, Complete Genome

Gene Summary

Adenine Count

919647 bp

Thymine Count

933329 bp

Guanine Count

1501514 bp

Cytosine Count

1491975 bp

Genome Length

4846465 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3443 family proteinKP004_09460Q086E4Negative2135707 - 213716148477.6
duf2844 domain-containing proteinKP004_09465Not AvailableNegative2137148 - 213761517167.8
omph family outer membrane proteinKP004_09470Not AvailableNegative2137824 - 213846822541.2
hypothetical proteinKP004_09475Not AvailablePositive2138671 - 213896111066.3
hypothetical proteinKP004_09480Not AvailablePositive2139144 - 213941010178.7
hypothetical proteinKP004_09485Not AvailablePositive2139419 - 214028532441.9
type ii toxin-antitoxin system yhav family toxinKP004_09490P64595Positive2140287 - 214067915373.3
4'-phosphopantetheinyl transferase superfamily proteinKP004_09495P37695Negative2140806 - 214153726932.2
nad-dependent epimerase/dehydratase family proteinKP004_09500Q8PDW5Negative2141534 - 214252635253.1
amp-binding proteinKP004_09505Q8EG64Negative2142514 - 214416359843.4

Displaying genes 1891 – 1900 of 4210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.