Geomonas oryzisoli RG10

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Geomonas

Description

Geomonas oryzisoli RG10 is a bacterial strain characterized by having a single replicon and is recorded under the accession number CP076723.1. This taxon is noteworthy due to its specific ecological niche, which suggests a potential role in its native environment. The presence of a single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in resource utilization within its habitat. The reference accession provides a genetic basis for further studies, allowing researchers to explore its metabolic pathways, interactions, and potential applications. Understanding the traits of Geomonas oryzisoli RG10 can lead to insights into its ecological roles, particularly in relation to soil microbiomes. Given its association with rice paddy soil, it may play a crucial role in nutrient cycling or plant growth promotion, contributing to agricultural sustainability. Further investigations into its genomic features and functions could illuminate its contributions to soil health and crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusGeomonas
SpeciesGeomonas oryzisoli
StrainRG10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomonas oryzisoli RG10, Complete Genome

Gene Summary

Adenine Count

919647 bp

Thymine Count

933329 bp

Guanine Count

1501514 bp

Cytosine Count

1491975 bp

Genome Length

4846465 bp

Protein-coding Genes

4136 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidine/deoxycytidylate deaminase family proteinKP004_05410O43012Positive1211242 - 121169716712.3
transcriptional regulator nrdrKP004_05415B5E858Positive1211694 - 121214617439.1
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdKP004_05420P50853Positive1212155 - 121326739439.5
riboflavin synthaseKP004_05425P51961Positive1213425 - 121406922952.7
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiKP004_05430A0Q3H7Positive1214205 - 121540743543.9
6,7-dimethyl-8-ribityllumazine synthaseKP004_05435C6E3M5Positive1215424 - 121589116504.9
transcription antitermination factor nusbKP004_05440B5E853Positive1215892 - 121632916017.1
homoserine dehydrogenaseKP004_05445P29365Positive1216408 - 121771546426.2
hemerythrin domain-containing proteinKP004_05450Not AvailableNegative1218802 - 121935020782.6
iron-sulfur cluster-binding oxidoreductaseKP004_05455O30082Negative1219354 - 121981216505.0

Displaying genes 1081 – 1090 of 4210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.