Pseudomonas xanthosomatis COR54

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas xanthosomatis COR54 is characterized by having a single replicon, which is significant for its genomic structure and stability. The specific accession number for this strain is CP077075.1, which serves as a unique identifier for its genomic sequence in biological databases. The single replicon in Pseudomonas xanthosomatis COR54 suggests a streamlined genetic organization that may contribute to its adaptability in various environments. This trait can be crucial for its survival and competitive edge, especially in diverse ecological niches where Pseudomonas species are often found. In terms of ecological insight, the presence of Pseudomonas species, including Pseudomonas xanthosomatis, in various habitats indicates their potential role in bioremediation and nutrient cycling. These bacteria are known for their metabolic versatility, allowing them to thrive in environments that may be inhospitable to other microorganisms. As such, Pseudomonas xanthosomatis COR54 may play a role in the degradation of pollutants or the cycling of nutrients, further highlighting its ecological importance. Understanding the genetic and ecological traits of this strain can provide valuable insights into its potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas xanthosomatis
StrainCOR54

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas xanthosomatis COR54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas xanthosomatis COR54, Complete Genome

Gene Summary

Adenine Count

1066524 bp

Thymine Count

1077693 bp

Guanine Count

1932628 bp

Cytosine Count

1910259 bp

Genome Length

5987104 bp

Protein-coding Genes

5116 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54 dependent transcriptional regulatorKSS93_03430Q9HU19Negative773081 - 77449051246.5
sensor histidine kinaseKSS93_03435Q9HU20Negative774487 - 77630167286.3
dtdp-4-dehydrorhamnose reductaseKSS93_03440Q2SYI1Negative776340 - 77720031088.1
dtdp-4-dehydrorhamnose 3,5-epimeraseKSS93_03445Q9HU21Negative777197 - 77774520607.3
glucose-1-phosphate thymidylyltransferase rfbaKSS93_03450P55257Negative777732 - 77861632603.8
dtdp-glucose 4,6-dehydrataseKSS93_03455P27830Negative778613 - 77969239923.1
aminotransferaseKSS93_03460Q8BWU8Positive779861 - 782761104893.0
agmatine deiminaseKSS93_03465Q88R68Positive783186 - 78429240882.1
tonb-dependent siderophore receptorKSS93_03470A0A0H2ZI93Negative784787 - 78687177700.1
oprd family porinKSS93_03475P32722Positive787379 - 78868047205.8

Displaying genes 781 – 790 of 5284 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.