Pseudomonas xanthosomatis COR54

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas xanthosomatis COR54 is characterized by having a single replicon, which is significant for its genomic structure and stability. The specific accession number for this strain is CP077075.1, which serves as a unique identifier for its genomic sequence in biological databases. The single replicon in Pseudomonas xanthosomatis COR54 suggests a streamlined genetic organization that may contribute to its adaptability in various environments. This trait can be crucial for its survival and competitive edge, especially in diverse ecological niches where Pseudomonas species are often found. In terms of ecological insight, the presence of Pseudomonas species, including Pseudomonas xanthosomatis, in various habitats indicates their potential role in bioremediation and nutrient cycling. These bacteria are known for their metabolic versatility, allowing them to thrive in environments that may be inhospitable to other microorganisms. As such, Pseudomonas xanthosomatis COR54 may play a role in the degradation of pollutants or the cycling of nutrients, further highlighting its ecological importance. Understanding the genetic and ecological traits of this strain can provide valuable insights into its potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas xanthosomatis
StrainCOR54

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas xanthosomatis COR54
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas xanthosomatis COR54, Complete Genome

Gene Summary

Adenine Count

1066524 bp

Thymine Count

1077693 bp

Guanine Count

1932628 bp

Cytosine Count

1910259 bp

Genome Length

5987104 bp

Protein-coding Genes

5116 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tssfKSS93_00580Q9I744Positive131527 - 13338969353.8
type vi secretion system baseplate subunit tssgKSS93_00585Not AvailablePositive133404 - 13440237452.2
type vi secretion system atpase tsshKSS93_00590Q9I742Positive134395 - 13707097479.1
type vi secretion system tip protein vgrgKSS93_00595Q9I741Positive137082 - 13901072242.7
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseKSS93_00600A5WAF9Negative139317 - 14012929936.6
hdod domain-containing proteinKSS93_00605O83112Negative140133 - 14095130414.3
class i sam-dependent rrna methyltransferaseKSS93_00610Q5E4P6Positive141189 - 14238544015.1
ei24 domain-containing proteinKSS93_00615P34024Negative142557 - 14363238351.7
dihydroxy-acid dehydrataseKSS93_00620Q88CQ2Positive143970 - 14581165670.6
haloacid dehalogenase-like hydrolaseKSS93_00625Q9HTR2Negative145973 - 14699838061.5

Displaying genes 211 – 220 of 5284 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.