Pseudomonas fitomaticsae FIT81

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fitomaticsae FIT81 is characterized by its single replicon, which is a distinctive trait among bacterial genomes. This organism has been cataloged under the accession number CP075567.1, indicating its genomic sequence is available for research and reference. The single replicon structure of Pseudomonas fitomaticsae FIT81 suggests a streamlined genomic organization that may contribute to its adaptability and efficiency in various environments. This could play a role in its ecological interactions, particularly in soil and plant-associated environments where Pseudomonas species are known to thrive. The biological implications of such a genomic structure can be significant. A single replicon may facilitate rapid replication and gene expression, allowing the bacterium to respond swiftly to environmental changes or stresses. This adaptability is crucial for survival in dynamic ecosystems, especially in relation to plant health, as Pseudomonas species can be involved in plant growth promotion and disease suppression. Overall, the genomic information available for Pseudomonas fitomaticsae FIT81 underlines its potential relevance in agricultural and ecological contexts, particularly in understanding the roles of bacteria in soil health and plant interactions. Further studies could elucidate the specific functions and applications of this bacterium in biocontrol and plant growth promotion.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fitomaticsae
StrainFIT81

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fitomaticsae FIT81
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fitomaticsae FIT81, Complete Genome

Gene Summary

Adenine Count

1283192 bp

Thymine Count

1275381 bp

Guanine Count

1961910 bp

Cytosine Count

1972313 bp

Genome Length

6492796 bp

Protein-coding Genes

5664 genes

Non-Coding Genes

244 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4879 domain-containing proteinKJY40_26235Not AvailableNegative5804763 - 580521215752.7
ncs2 family permeaseKJY40_26240P31466Positive5805433 - 580672844848.3
trna (uridine(54)-c5)-methyltransferase trmaKJY40_26245Q3K6G9Positive5806725 - 580780440585.4
hypothetical proteinKJY40_26250Not AvailableNegative5807860 - 580830615858.0
duf4160 domain-containing proteinKJY40_26255Not AvailableNegative5808303 - 580873116418.6
lysr family transcriptional regulatorKJY40_26260P30864Positive5808936 - 580984734174.0
type ii 3-dehydroquinate dehydrataseKJY40_26265Q88K84Positive5809989 - 581042915923.1
shikimate dehydrogenaseKJY40_26270Q82M83Positive5810435 - 581128930562.8
tetr/acrr family transcriptional regulatorKJY40_26275Q88FX7Negative5811324 - 581200126009.1
bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family proteinKJY40_26280Q88JU3Negative5812104 - 581400570503.5

Displaying genes 5251 – 5260 of 5908 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.