Gordonia pseudamarae

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia pseudamarae is a species characterized by the presence of flagella, which are appendages that enable motility. This feature is significant for its ecological interactions and adaptation to various environments. The bacterium has a single replicon, indicating a streamlined genetic architecture that may contribute to its efficiency in replication and cellular processes. The genomic sequence of Gordonia pseudamarae is documented under the accession number CP045809.1, which provides a basis for further studies on its genetic composition and potential functional capabilities. Understanding its genetic makeup can offer insights into how this bacterium interacts with its environment and other organisms. Biologically, Gordonia pseudamarae may play a role in the degradation of complex organic compounds, a trait often associated with the Gordonia genus. This trait is ecologically significant, as it suggests a potential contribution to bioremediation processes, where microorganisms are employed to clean up contaminated environments. The presence of flagella may enhance its ability to navigate through various substrates, thereby improving its efficacy in such ecological roles. Overall, the traits of Gordonia pseudamarae position it as an organism of interest in microbiological and environmental studies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia pseudamarae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia pseudamarae , Complete Genome

Gene Summary

Adenine Count

848878 bp

Thymine Count

853326 bp

Guanine Count

1721837 bp

Cytosine Count

1722967 bp

Genome Length

5147008 bp

Protein-coding Genes

4401 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s11GII31_16755Q5Z1L1Negative3791965 - 379237214394.2
30s ribosomal protein s13GII31_16760Q0S3F0Negative3792372 - 379274013688.8
50s ribosomal protein l36GII31_16765C0ZW50Negative3792974 - 37930874349.57
translation initiation factor if-1GII31_16770A0QKV0Negative3793250 - 37934718459.44
phage holin family proteinGII31_16775Q53868Positive3793772 - 379417614937.7
duf541 domain-containing proteinGII31_16780P0A3U8Positive3794211 - 379492424067.2
tigr03620 family f420-dependent llm class oxidoreductaseGII31_16785Not AvailableNegative3794941 - 379579530230.8
phnd/ssua/transferrin family substrate-binding proteinGII31_16790P75853Positive3796114 - 379720238877.0
abc transporter permease subunitGII31_16795P40401Positive3797199 - 379808931909.4
atp-binding cassette domain-containing proteinGII31_16800Q5YYR7Positive3798065 - 379885328225.9

Displaying genes 3351 – 3360 of 4470 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.