Methanococcoides orientis LMO-1

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanococcoides

Description

Methanococcoides orientis LMO-1 is a coccoid archaeon characterized by its spherical shape. This microorganism possesses flagella, which are structures that facilitate movement. Notably, Methanococcoides orientis LMO-1 has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The genomic information for this organism is cataloged under the accession number CP073710.1. As a member of the methanogenic archaea, Methanococcoides orientis LMO-1 plays a significant role in the carbon cycle, particularly in anaerobic environments where it contributes to methane production. This process is crucial for energy flow in ecosystems such as wetlands, marine sediments, and the digestive systems of certain animals. The presence of flagella suggests that Methanococcoides orientis LMO-1 may be capable of motility, which can enhance its ability to navigate through complex environments, potentially aiding in its survival and ecological interactions. The ecological insights provided by studying Methanococcoides orientis LMO-1 highlight the importance of methanogens in biogeochemical processes, particularly in the context of methane emissions and energy production in anaerobic habitats. Understanding the traits and functions of such microorganisms can inform broader ecological and environmental studies, especially regarding greenhouse gas dynamics and the roles of microbial communities in various ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanococcoides
SpeciesMethanococcoides orientis
StrainLMO-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanococcoides orientis LMO-1, Complete Genome

Gene Summary

Adenine Count

716053 bp

Thymine Count

713482 bp

Guanine Count

535055 bp

Cytosine Count

529572 bp

Genome Length

2494162 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s9J7W08_00705Q8TT42Positive132239 - 13264314519.5
dna-directed rna polymerase subunit nJ7W08_00710Q12TI4Positive132658 - 1328467214.81
dna-directed rna polymerase subunit kJ7W08_00720A0B6E6Positive133165 - 1333446754.18
30s ribosomal protein s2J7W08_00725Q12TI2Positive133359 - 13400323560.9
memo1 family proteinJ7W08_00730Q12TI1Positive134085 - 13487928940.6
mevalonate kinaseJ7W08_00735B6YST1Positive134906 - 13581730972.2
isopentenyl phosphate kinase family proteinJ7W08_00740O26153Positive135814 - 13658727023.4
type 2 isopentenyl-diphosphate delta-isomeraseJ7W08_00745Q12TH8Positive136603 - 13768238228.6
rnase j family beta-casp ribonucleaseJ7W08_00750Q9HQI4Positive137799 - 13914249886.3
polyprenyl synthetase family proteinJ7W08_00755Q8PW34Positive139174 - 14014235206.2

Displaying genes 141 – 150 of 2431 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.