Methanococcoides orientis LMO-1

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanococcoides

Description

Methanococcoides orientis LMO-1 is a coccoid archaeon characterized by its spherical shape. This microorganism possesses flagella, which are structures that facilitate movement. Notably, Methanococcoides orientis LMO-1 has a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The genomic information for this organism is cataloged under the accession number CP073710.1. As a member of the methanogenic archaea, Methanococcoides orientis LMO-1 plays a significant role in the carbon cycle, particularly in anaerobic environments where it contributes to methane production. This process is crucial for energy flow in ecosystems such as wetlands, marine sediments, and the digestive systems of certain animals. The presence of flagella suggests that Methanococcoides orientis LMO-1 may be capable of motility, which can enhance its ability to navigate through complex environments, potentially aiding in its survival and ecological interactions. The ecological insights provided by studying Methanococcoides orientis LMO-1 highlight the importance of methanogens in biogeochemical processes, particularly in the context of methane emissions and energy production in anaerobic habitats. Understanding the traits and functions of such microorganisms can inform broader ecological and environmental studies, especially regarding greenhouse gas dynamics and the roles of microbial communities in various ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanococcoides
SpeciesMethanococcoides orientis
StrainLMO-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanococcoides orientis LMO-1, Complete Genome

Gene Summary

Adenine Count

716053 bp

Thymine Count

713482 bp

Guanine Count

535055 bp

Cytosine Count

529572 bp

Genome Length

2494162 bp

Protein-coding Genes

2355 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal abc transporter atp-binding proteinJ7W08_06320P48334Positive1329051 - 132980027925.2
metal abc transporter permeaseJ7W08_06325P73087Positive1329812 - 133063929966.9
hamp domain-containing proteinJ7W08_06330P23545Positive1331002 - 133319182229.3
pas domain s-box proteinJ7W08_06335Q8THF6Positive1333340 - 133523571990.3
argininosuccinate lyaseJ7W08_06340Q12X66Positive1335429 - 133690454125.8
glu-trna(gln) amidotransferase subunit gatdJ7W08_06345Q12X65Positive1336951 - 133820145063.0
type iv pilin n-terminal domain-containing proteinJ7W08_06350O29169Negative1338291 - 133878517160.6
type iv pilin n-terminal domain-containing proteinJ7W08_06355O29169Negative1338896 - 133937216567.6
duf5371 domain-containing proteinJ7W08_06360O28556Negative1339414 - 13396207948.55
formate-- phosphoribosylaminoimidazolecarboxamide ligase family proteinJ7W08_06365Q57600Negative1339936 - 134109344124.2

Displaying genes 1261 – 1270 of 2431 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.