Bradyrhizobium barranii subsp. apii 38S5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium barranii subsp. apii 38S5 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This subspecies is notable for having four replicons, which may contribute to its genetic versatility and adaptability. The organism is cataloged under several accessions, namely CP096251.1, CP096252.1, CP096253.1, and CP096254.1, providing a basis for its genomic characterization and further study. As a member of the Bradyrhizobium genus, B. barranii subsp. apii 38S5 is likely involved in symbiotic relationships with leguminous plants, specifically those in the Apiaceae family, as implied by its name. This symbiotic association is critical for nitrogen fixation, a process that converts atmospheric nitrogen into a form usable by plants, thereby enhancing soil fertility. The presence of flagella not only aids in mobility but may also facilitate the bacterium's colonization of plant roots, which is essential for establishing symbiosis. The four replicons suggest a complex genetic architecture that could enable the bacterium to thrive in various environmental conditions, potentially influencing its ecological interactions. In summary, Bradyrhizobium barranii subsp. apii 38S5 demonstrates important microbial traits such as rod shape, motility via flagella, and a multi-replicon structure, all of which are significant for its role in symbiotic nitrogen fixation within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium barranii
Strain38S5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium barranii subsp. apii 38S5, Complete Genome

Gene Summary

Adenine Count

1811861 bp

Thymine Count

1827286 bp

Guanine Count

3158550 bp

Cytosine Count

3155579 bp

Genome Length

9953276 bp

Protein-coding Genes

9410 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna ligaseJ4G48_0003150Q1II25Negative678036 - 67999472670.9
ligase-associated dna damage response exonucleaseJ4G48_0003155B1ZZL9Negative679991 - 68102837467.8
methyltransferase domain-containing proteinJ4G48_0003160A6UYW3Positive681161 - 68208733498.4
abc transporter substrate-binding proteinJ4G48_0003165Q2YK58Positive682204 - 68343344618.1
ligase-associated dna damage response dexh box helicaseJ4G48_0003170Q57742Positive683665 - 68624195105.6
ligase-associated dna damage response endonuclease pdemJ4G48_0003175Not AvailablePositive686358 - 68705625072.9
hypothetical proteinJ4G48_0003180Not AvailablePositive687378 - 68780916214.0
duf2865 domain-containing proteinJ4G48_0003185Not AvailableNegative687921 - 68870327105.1
orotate phosphoribosyltransferaseJ4G48_0003190Q89BL4Negative688935 - 68949820193.5
glutathione s-transferase family proteinJ4G48_0003195P77526Positive689670 - 69029623522.7

Displaying genes 841 – 850 of 10159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.