Bradyrhizobium barranii subsp. apii 38S5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium barranii subsp. apii 38S5 is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility. This subspecies is notable for having four replicons, which may contribute to its genetic versatility and adaptability. The organism is cataloged under several accessions, namely CP096251.1, CP096252.1, CP096253.1, and CP096254.1, providing a basis for its genomic characterization and further study. As a member of the Bradyrhizobium genus, B. barranii subsp. apii 38S5 is likely involved in symbiotic relationships with leguminous plants, specifically those in the Apiaceae family, as implied by its name. This symbiotic association is critical for nitrogen fixation, a process that converts atmospheric nitrogen into a form usable by plants, thereby enhancing soil fertility. The presence of flagella not only aids in mobility but may also facilitate the bacterium's colonization of plant roots, which is essential for establishing symbiosis. The four replicons suggest a complex genetic architecture that could enable the bacterium to thrive in various environmental conditions, potentially influencing its ecological interactions. In summary, Bradyrhizobium barranii subsp. apii 38S5 demonstrates important microbial traits such as rod shape, motility via flagella, and a multi-replicon structure, all of which are significant for its role in symbiotic nitrogen fixation within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium barranii
Strain38S5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium barranii subsp. apii 38S5, Complete Genome

Gene Summary

Adenine Count

1811861 bp

Thymine Count

1827286 bp

Guanine Count

3158550 bp

Cytosine Count

3155579 bp

Genome Length

9953276 bp

Protein-coding Genes

9410 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJ4G48_0000400Not AvailableNegative82075 - 8242512623.8
tetr/acrr family transcriptional regulatorJ4G48_0000405Not AvailablePositive82533 - 8306319559.7
trm112 family proteinJ4G48_0000410Q89WS6Positive83186 - 833837246.87
ubiquinone biosynthesis hydroxylaseJ4G48_0000415Q2RMZ4Negative83496 - 8471643618.6
acyl-coa thioesterase iiJ4G48_0000420P0AGG3Positive84933 - 8579632668.3
duf4339 domain-containing proteinJ4G48_0000425Not AvailableNegative85834 - 8674532633.4
p-ii family nitrogen regulatorJ4G48_0000430O54053Positive86985 - 8732312117.8
ammonium transporterJ4G48_0000435Q07429Positive87457 - 8875845473.1
metalloregulator arsr/smtb family transcription factorJ4G48_0000440O32242Positive88801 - 8911511718.2
hypothetical proteinJ4G48_0000445Not AvailablePositive89151 - 8946812001.2

Displaying genes 291 – 300 of 10159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.