Polaribacter cellanae SM13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter cellanae SM13 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic organization. The genomic information for this strain is cataloged under the accession number CP071869.1. As a member of the Polaribacter genus, P. cellanae SM13 is likely to play a role in aquatic environments, particularly in polar regions. Members of the Polaribacter genus are known for their adaptability to cold temperatures and their involvement in biogeochemical cycles, particularly in marine ecosystems. This ecological insight suggests that P. cellanae SM13 may contribute to nutrient cycling and organic matter decomposition in its native habitat. The unique traits of P. cellanae SM13 contribute to our understanding of microbial diversity and function in polar marine environments, highlighting the importance of studying such organisms for insights into ecological dynamics and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter cellanae
StrainSM13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter cellanae SM13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter cellanae SM13, Complete Genome

Gene Summary

Adenine Count

1444926 bp

Thymine Count

1439758 bp

Guanine Count

634113 bp

Cytosine Count

624367 bp

Genome Length

4143164 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent zinc proteaseJ3359_03040A8H4D4Positive672852 - 67334018636.6
duf4258 domain-containing proteinJ3359_03045Not AvailablePositive673469 - 67383714084.1
ahpc/tsa family proteinJ3359_03050Q73B22Negative674806 - 67589142026.3
is110 family transposaseJ3359_03055Not AvailableNegative675936 - 67729451519.5
winged helix-turn-helix transcriptional regulatorJ3359_03060O32242Positive677850 - 67817012635.3
srpbcc domain-containing proteinJ3359_03065Not AvailablePositive678179 - 67864317925.7
doxx family proteinJ3359_03070Not AvailablePositive678651 - 67904314597.4
ydei family proteinJ3359_03075P96666Positive679046 - 67962422712.6
hypothetical proteinJ3359_03080Not AvailableNegative680307 - 68110729007.9
tonb-dependent receptorJ3359_03085P11461Positive681681 - 68402386234.8

Displaying genes 651 – 660 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.