Polaribacter cellanae SM13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter cellanae SM13 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic organization. The genomic information for this strain is cataloged under the accession number CP071869.1. As a member of the Polaribacter genus, P. cellanae SM13 is likely to play a role in aquatic environments, particularly in polar regions. Members of the Polaribacter genus are known for their adaptability to cold temperatures and their involvement in biogeochemical cycles, particularly in marine ecosystems. This ecological insight suggests that P. cellanae SM13 may contribute to nutrient cycling and organic matter decomposition in its native habitat. The unique traits of P. cellanae SM13 contribute to our understanding of microbial diversity and function in polar marine environments, highlighting the importance of studying such organisms for insights into ecological dynamics and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter cellanae
StrainSM13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter cellanae SM13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter cellanae SM13, Complete Genome

Gene Summary

Adenine Count

1444926 bp

Thymine Count

1439758 bp

Guanine Count

634113 bp

Cytosine Count

624367 bp

Genome Length

4143164 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide biosynthesis proteinJ3359_17305P39853Positive3926193 - 392808871242.3
polysaccharide biosynthesis/export family proteinJ3359_17310Q45407Positive3928137 - 392890728671.7
polysaccharide biosynthesis tyrosine autokinaseJ3359_17315O52788Positive3928911 - 393129289172.2
histidinol phosphataseJ3359_17320P39852Negative3931302 - 393204228662.8
n-acetylglucosamine kinaseJ3359_17325Not AvailablePositive3932168 - 393301932661.7
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseJ3359_17330P96613Negative3933012 - 393426847026.9
gliding motility lipoprotein gldjJ3359_17335Q0P5L5Negative3934414 - 393608463991.7
type ix secretion system sortase poruJ3359_17340Not AvailablePositive3936289 - 3939753129503.0
type ix secretion system outer membrane channel protein porvJ3359_17345Not AvailablePositive3939790 - 394091741217.3
cytidine deaminaseJ3359_17350Q9KD53Positive3940994 - 394147617449.3

Displaying genes 3471 – 3480 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.