Polaribacter cellanae SM13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter cellanae SM13 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic organization. The genomic information for this strain is cataloged under the accession number CP071869.1. As a member of the Polaribacter genus, P. cellanae SM13 is likely to play a role in aquatic environments, particularly in polar regions. Members of the Polaribacter genus are known for their adaptability to cold temperatures and their involvement in biogeochemical cycles, particularly in marine ecosystems. This ecological insight suggests that P. cellanae SM13 may contribute to nutrient cycling and organic matter decomposition in its native habitat. The unique traits of P. cellanae SM13 contribute to our understanding of microbial diversity and function in polar marine environments, highlighting the importance of studying such organisms for insights into ecological dynamics and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter cellanae
StrainSM13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter cellanae SM13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter cellanae SM13, Complete Genome

Gene Summary

Adenine Count

1444926 bp

Thymine Count

1439758 bp

Guanine Count

634113 bp

Cytosine Count

624367 bp

Genome Length

4143164 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 13 proteinJ3359_16905Q8A1G0Positive3823822 - 382577774767.0
duf5110 domain-containing proteinJ3359_16910B3PEE6Positive3825910 - 382832792617.6
alpha-amylaseJ3359_16915P14899Positive3828466 - 383034072151.9
alpha-amylaseJ3359_16920P25718Positive3830404 - 383206263422.9
glycoside hydrolase family 97 proteinJ3359_16925G8JZS4Positive3832065 - 383418280213.8
luxr family transcriptional regulatorJ3359_16930Not AvailablePositive3834663 - 3837467108693.0
tonb-dependent receptorJ3359_16935T2KPJ3Positive3837677 - 3840679109433.0
ragb/susd family nutrient uptake outer membrane proteinJ3359_16940T2KN63Positive3840691 - 384218155092.7
hypothetical proteinJ3359_16945Not AvailablePositive3842196 - 384429574446.4
glycoside hydrolase family 16 proteinJ3359_16950P45798Positive3844306 - 384592858416.6

Displaying genes 3391 – 3400 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.