Polaribacter cellanae SM13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter cellanae SM13 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic organization. The genomic information for this strain is cataloged under the accession number CP071869.1. As a member of the Polaribacter genus, P. cellanae SM13 is likely to play a role in aquatic environments, particularly in polar regions. Members of the Polaribacter genus are known for their adaptability to cold temperatures and their involvement in biogeochemical cycles, particularly in marine ecosystems. This ecological insight suggests that P. cellanae SM13 may contribute to nutrient cycling and organic matter decomposition in its native habitat. The unique traits of P. cellanae SM13 contribute to our understanding of microbial diversity and function in polar marine environments, highlighting the importance of studying such organisms for insights into ecological dynamics and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter cellanae
StrainSM13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter cellanae SM13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter cellanae SM13, Complete Genome

Gene Summary

Adenine Count

1444926 bp

Thymine Count

1439758 bp

Guanine Count

634113 bp

Cytosine Count

624367 bp

Genome Length

4143164 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxypeptidase-like regulatory domain-containing proteinJ3359_14455Q8A1G1Negative3225909 - 322712647271.2
m3 family metallopeptidaseJ3359_14460P27298Negative3227221 - 322923677198.7
5-(carboxyamino)imidazole ribonucleotide mutaseJ3359_14465Q9WYS7Negative3229292 - 322977116717.7
virulence protein rhum/fic/doc family proteinJ3359_14470A0QRY0Negative3229780 - 323073036370.4
5-(carboxyamino)imidazole ribonucleotide synthaseJ3359_14475P55195Negative3230876 - 323203343385.2
phosphoribosylaminoimidazole carboxylaseJ3359_14480Not AvailableNegative3232084 - 323250915248.6
transcription elongation factor greaJ3359_14485A5FJJ8Positive3232694 - 323316717612.2
hit family proteinJ3359_14490P0A5B6Positive3233222 - 323360814512.7
hypothetical proteinJ3359_14495Not AvailablePositive3233877 - 32341018792.97
hamp domain-containing histidine kinaseJ3359_14500O31671Negative3234098 - 323524944017.9

Displaying genes 2901 – 2910 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.