Polaribacter cellanae SM13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter cellanae SM13 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic organization. The genomic information for this strain is cataloged under the accession number CP071869.1. As a member of the Polaribacter genus, P. cellanae SM13 is likely to play a role in aquatic environments, particularly in polar regions. Members of the Polaribacter genus are known for their adaptability to cold temperatures and their involvement in biogeochemical cycles, particularly in marine ecosystems. This ecological insight suggests that P. cellanae SM13 may contribute to nutrient cycling and organic matter decomposition in its native habitat. The unique traits of P. cellanae SM13 contribute to our understanding of microbial diversity and function in polar marine environments, highlighting the importance of studying such organisms for insights into ecological dynamics and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter cellanae
StrainSM13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter cellanae SM13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter cellanae SM13, Complete Genome

Gene Summary

Adenine Count

1444926 bp

Thymine Count

1439758 bp

Guanine Count

634113 bp

Cytosine Count

624367 bp

Genome Length

4143164 bp

Protein-coding Genes

3585 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prephenate dehydrogenaseJ3359_13755P20692Positive3062839 - 306369031728.5
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type iiJ3359_13760P39912Positive3063712 - 306479440697.0
ribosome small subunit-dependent gtpase aJ3359_13765A0LY86Positive3065286 - 306626337351.4
d-tyrosyl-trna(tyr) deacylaseJ3359_13770A5FMN0Positive3066267 - 306671916582.2
tatd family hydrolaseJ3359_13775Q8K9J1Positive3066734 - 306739925609.2
trna threonylcarbamoyladenosine dehydrataseJ3359_13780O32037Positive3067521 - 306823426223.2
ycei family proteinJ3359_13785Q48PB8Positive3068318 - 306895322689.3
duf3857 domain-containing proteinJ3359_13790Not AvailablePositive3069094 - 307093870725.3
duf3857 domain-containing proteinJ3359_13795Not AvailablePositive3070940 - 307289875241.6
cpbp family intramembrane metalloproteaseJ3359_13800Not AvailableNegative3072913 - 307353924334.0

Displaying genes 2761 – 2770 of 3659 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.