Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | JYB87_04395 | Q8EBS5 | Negative | 1014984 - 1017845 | 108009.0 |
| dna polymerase iii subunit chi | JYB87_04400 | P28905 | Negative | 1017859 - 1018317 | 17206.3 |
| atp-binding cassette domain-containing protein | JYB87_04405 | P31060 | Negative | 1018632 - 1020065 | 53663.3 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | JYB87_04410 | Q72GL2 | Positive | 1020306 - 1020848 | 19244.0 |
| m1 family metallopeptidase | JYB87_04415 | Q6K4E7 | Negative | 1021023 - 1022990 | 73914.0 |
| fdhf/ydep family oxidoreductase | JYB87_04420 | Q8XAX1 | Negative | 1023253 - 1025562 | 85358.9 |
| fusc family protein | JYB87_04425 | C6DIM3 | Negative | 1025783 - 1027837 | 74399.2 |
| hlyd family secretion protein | JYB87_04430 | P76185 | Negative | 1027846 - 1028703 | 31774.1 |
| duf1656 domain-containing protein | JYB87_04435 | A7FDT4 | Negative | 1028707 - 1028907 | 7609.56 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | JYB87_04440 | P0A9L3 | Positive | 1029279 - 1029896 | 21872.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

