Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JYB87_04195 | Not Available | Positive | 971777 - 971941 | 6120.26 |
| hypothetical protein | JYB87_04200 | Not Available | Negative | 972273 - 972758 | 18395.7 |
| is3 family transposase | JYB87_04205 | P0CF79 | Negative | 972791 - 973941 | 44017.8 |
| hypothetical protein | JYB87_04210 | Not Available | Negative | 973967 - 975127 | 45090.5 |
| exonuclease domain-containing protein | JYB87_04215 | Q5BKS4 | Negative | 975732 - 976718 | 37601.6 |
| translesion error-prone dna polymerase v autoproteolytic subunit | JYB87_04220 | P0AG12 | Positive | 976894 - 977301 | 14913.0 |
| y-family dna polymerase | JYB87_04225 | P22494 | Positive | 977301 - 978563 | 47201.0 |
| nucleoside phosphorylase | JYB87_04230 | Not Available | Positive | 978630 - 979263 | 22663.9 |
| hypothetical protein | JYB87_04235 | Not Available | Positive | 979742 - 980032 | 11163.4 |
| hypothetical protein | JYB87_04240 | Not Available | Negative | 980395 - 980745 | 13294.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

