Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | JYB87_04095 | Q7ZAJ8 | Positive | 951225 - 952127 | 33883.0 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | JYB87_04100 | P39691 | Positive | 952285 - 953007 | 26336.1 |
| single-stranded-dna-specific exonuclease recj | JYB87_04105 | P39693 | Positive | 953100 - 954824 | 62684.9 |
| hypothetical protein | JYB87_04110 | Not Available | Positive | 955170 - 955706 | 20379.4 |
| cupin domain-containing protein | JYB87_04115 | Not Available | Positive | 955707 - 956042 | 12467.7 |
| ribose-5-phosphate isomerase rpia | JYB87_04120 | A6WRS7 | Negative | 956126 - 956785 | 23428.2 |
| duf808 domain-containing protein | JYB87_04125 | P46125 | Positive | 956963 - 957904 | 33065.3 |
| superoxide dismutase family protein | JYB87_04130 | P00446 | Negative | 958082 - 958621 | 18084.7 |
| 5-formyltetrahydrofolate cyclo-ligase | JYB87_04135 | P0AC29 | Negative | 958735 - 959358 | 23150.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 959484 - 959668 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

