Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella avicenniae |
| Strain | FJAT 51800 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086255 bp
Thymine Count
1087571 bp
Guanine Count
1013547 bp
Cytosine Count
1014309 bp
Genome Length
4201682 bp
Protein-coding Genes
3536 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-associated protein rapa | JYB87_02395 | A0KSP4 | Negative | 548232 - 551138 | 109479.0 |
| phoh family protein | JYB87_02400 | O07635 | Positive | 551414 - 552808 | 52081.4 |
| rna polymerase sigma factor | JYB87_02405 | Not Available | Negative | 552859 - 553344 | 18831.7 |
| tonb-dependent receptor | JYB87_02410 | P17315 | Negative | 553520 - 556294 | 102544.0 |
| hypothetical protein | JYB87_02415 | Not Available | Negative | 556318 - 557460 | 42440.3 |
| response regulator | JYB87_02420 | Q54YZ9 | Positive | 557741 - 561433 | 140777.0 |
| zinc-dependent metalloprotease | JYB87_02425 | Not Available | Positive | 561496 - 563901 | 88578.6 |
| protein kinase | JYB87_02430 | F4IRW0 | Negative | 563934 - 565754 | 68727.7 |
| hypothetical protein | JYB87_02435 | Not Available | Positive | 565966 - 566313 | 13675.6 |
| thiopurine s-methyltransferase | JYB87_02440 | A3QI29 | Positive | 566380 - 567033 | 25133.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

