Shewanella avicenniae FJAT 51800

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella avicenniae FJAT 51800 is characterized by the presence of flagella, which may contribute to its motility and ability to inhabit various aquatic environments. This strain features a single replicon, indicating a streamlined genomic structure that may be advantageous for its adaptability and efficiency in metabolic processes. The genomic data for Shewanella avicenniae FJAT 51800 is cataloged under the accession CP071503.1, which provides a basis for further genomic and functional analyses. As a member of the Shewanella genus, this bacterium is likely to exhibit versatile metabolic capabilities, including the reduction of metals and the degradation of organic compounds, which are critical traits for ecological interactions, particularly in sediment environments. The presence of flagella suggests that Shewanella avicenniae FJAT 51800 can navigate through its environment, allowing it to exploit nutrient sources and engage in interactions with other microorganisms. This motility may facilitate its role in biogeochemical cycles, such as the cycling of carbon and sulfur, which is essential in aquatic ecosystems. Overall, these traits highlight the ecological significance of Shewanella avicenniae FJAT 51800 in its natural habitat, where it may contribute to nutrient recycling and the maintenance of microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella avicenniae
StrainFJAT 51800

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella avicenniae FJAT 51800, Complete Genome

Gene Summary

Adenine Count

1086255 bp

Thymine Count

1087571 bp

Guanine Count

1013547 bp

Cytosine Count

1014309 bp

Genome Length

4201682 bp

Protein-coding Genes

3536 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s9JYB87_02245A1SA66Negative523375 - 52376714550.9
50s ribosomal protein l13JYB87_02250A1SA67Negative523782 - 52421015833.3
afg1 family atpaseJYB87_02255P64613Negative524418 - 52552442290.9
degq family serine endoproteaseJYB87_02260P39099Positive525812 - 52717347284.0
outer membrane-stress sensor serine endopeptidase degsJYB87_02265P0AEE4Positive527340 - 52842238218.3
ribonuclease e inhibitor rrabJYB87_02270A1SAD4Negative528479 - 52888315162.2
1-acylglycerol-3-phosphate o-acyltransferaseJYB87_02275P44848Negative528935 - 52965126554.9
trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmdJYB87_02280Q4QKP6Positive530269 - 53099127127.3
transposaseJYB87_02285Not AvailableNegative531543 - 5317347079.6
ompa family proteinJYB87_02290P37665Positive532239 - 53290422764.0

Displaying genes 551 – 560 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.